Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that evm.TU.Chr14.636 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 11 1 evm.TU.Chr13.439 8.98 24.8 94.2% feature · violin
Cluster 11 2 evm.TU.Chr6.1646 9.92 22.9 87.1% feature · violin
Cluster 11 3 evm.TU.Chr14.636 10.41 22.0 83.8% feature · violin
Cluster 11 4 evm.TU.Chr6.941 7.32 21.7 85.1% feature · violin
Cluster 11 5 evm.TU.Chr7.772 8.00 21.1 81.3% feature · violin
Cluster 11 6 evm.TU.Chr2.176 10.97 20.3 76.8% feature · violin
Cluster 11 7 evm.TU.Chr11.84 11.79 19.3 73.0% feature · violin
Cluster 11 8 evm.TU.Chr11.696 7.73 19.3 74.7% feature · violin
Cluster 11 9 evm.TU.Chr2.491 2.31 16.1 96.3% feature · violin
Cluster 11 10 evm.TU.Chr14.465 4.88 14.1 58.1% feature · violin
Cluster 11 11 evm.TU.Chr14.743 1.89 14.0 95.4% feature · violin
Cluster 11 12 evm.TU.scaffold_757.24 7.63 13.9 53.1% feature · violin
Cluster 11 13 evm.TU.Chr8.516 2.76 13.7 89.2% feature · violin
Cluster 11 14 evm.TU.Chr6.1086 9.96 13.4 50.6% feature · violin
Cluster 11 15 evm.TU.Chr10.1311 3.15 13.0 66.8% feature · violin
Cluster 11 16 evm.TU.Chr9.603 6.95 12.6 48.5% feature · violin
Cluster 11 17 evm.TU.Chr2.1087 1.75 12.2 93.4% feature · violin
Cluster 11 18 evm.TU.Chr6.582 2.31 12.2 80.1% feature · violin
Cluster 11 19 evm.TU.Chr3.355 4.31 12.1 51.5% feature · violin
Cluster 11 20 evm.TU.Chr10.1545 7.29 11.8 45.2% feature · violin
Cluster 11 21 evm.TU.Chr3.1445 2.33 11.8 76.3% feature · violin
Cluster 11 22 evm.TU.Chr8.700 9.53 11.7 44.4% feature · violin
Cluster 11 23 evm.TU.Chr8.113 6.18 11.6 46.9% feature · violin
Cluster 11 24 evm.TU.Chr6.281 6.88 11.6 44.4% feature · violin
Cluster 11 25 evm.TU.Chr6.468 2.41 11.1 70.1% feature · violin
Cluster 11 26 evm.TU.Chr5.138 1.88 11.0 89.2% feature · violin
Cluster 11 27 evm.TU.Chr3.758 2.26 11.0 68.9% feature · violin
Cluster 11 28 evm.TU.Chr9.1342 2.31 10.9 70.1% feature · violin
Cluster 11 29 evm.TU.Chr14.780 2.15 10.8 73.4% feature · violin
Cluster 11 30 evm.TU.Chr6.1525 2.15 10.8 79.7% feature · violin
Cluster 11 31 evm.TU.Chr10.1444 2.91 10.8 55.2% feature · violin
Cluster 11 32 evm.TU.Chr4.1380 9.44 10.6 40.2% feature · violin
Cluster 11 33 evm.TU.Chr8.515 2.05 10.4 80.5% feature · violin
Cluster 11 34 evm.TU.Chr6.357 1.89 10.3 83.8% feature · violin
Cluster 11 35 evm.TU.Chr1.1124 1.20 10.1 96.3% feature · violin
Cluster 11 36 evm.TU.Chr14.273 2.36 9.9 59.3% feature · violin
Cluster 11 37 evm.TU.Chr10.254 1.28 9.9 94.6% feature · violin
Cluster 11 38 evm.TU.Chr10.1832 4.16 9.7 40.7% feature · violin
Cluster 11 39 evm.TU.Chr10.1544 6.60 9.6 36.9% feature · violin
Cluster 11 40 evm.TU.Chr14.888 9.66 9.3 35.3% feature · violin
Cluster 11 41 evm.TU.Chr9.859 4.08 9.3 39.4% feature · violin
Cluster 11 42 evm.TU.scaffold_757.8 7.59 9.3 35.3% feature · violin
Cluster 11 43 evm.TU.Chr8.522 2.81 9.0 45.6% feature · violin
Cluster 11 44 evm.TU.Chr8.876 4.81 9.0 36.1% feature · violin
Cluster 11 45 evm.TU.Chr6.239 2.13 8.9 56.8% feature · violin
Cluster 11 46 evm.TU.Chr3.1167 3.27 8.8 40.2% feature · violin
Cluster 11 47 evm.TU.Chr14.383 6.00 8.6 33.6% feature · violin
Cluster 11 48 evm.TU.Chr8.1295 2.73 8.5 42.7% feature · violin
Cluster 11 49 evm.TU.Chr10.1850 2.13 8.2 50.2% feature · violin
Cluster 11 50 evm.TU.Chr4.944 3.66 8.2 35.3% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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