Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that LOC5510098 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Neural 2 1 LOC5510098 1.24 15.9 87.8% feature · violin
Neural 2 2 LOC5521748 1.39 15.2 89.3% feature · violin
Neural 2 3 LOC5521644 1.37 14.4 88.1% feature · violin
Neural 2 4 LOC116616171 3.70 14.3 38.5% feature · violin
Neural 2 5 LOC125556661 1.29 14.1 82.2% feature · violin
Neural 2 6 LOC5520770 1.18 13.9 88.4% feature · violin
Neural 2 7 LOC5519551 1.70 13.5 64.5% feature · violin
Neural 2 8 LOC5508770 1.09 13.0 87.1% feature · violin
Neural 2 9 LOC116618583 0.46 12.9 99.6% feature · violin
Neural 2 10 LOC5504449 1.85 12.1 45.0% feature · violin
Neural 2 11 LOC5507032 1.41 11.8 56.6% feature · violin
Neural 2 12 LOC5521395 0.82 11.8 94.3% feature · violin
Neural 2 13 LOC125561738 1.70 11.8 53.9% feature · violin
Neural 2 14 LOC5507331 1.09 11.5 79.1% feature · violin
Neural 2 15 LOC5516533 1.58 11.5 57.4% feature · violin
Neural 2 16 LOC5505313 1.66 11.4 55.7% feature · violin
Neural 2 17 LOC5516044 0.69 11.2 94.6% feature · violin
Neural 2 18 LOC5505629 0.96 11.0 76.2% feature · violin
Neural 2 19 LOC5519484 1.52 10.9 55.9% feature · violin
Neural 2 20 LOC5505323 1.49 10.1 52.1% feature · violin
Neural 2 21 LOC5512503 2.92 9.8 32.5% feature · violin
Neural 2 22 LOC5505316 1.78 9.7 40.1% feature · violin
Neural 2 23 LOC5508080 2.53 9.4 40.8% feature · violin
Neural 2 24 LOC5512343 1.09 9.4 58.9% feature · violin
Neural 2 25 LOC116605895 3.17 9.3 29.2% feature · violin
Neural 2 26 LOC5502685 1.59 9.3 36.7% feature · violin
Neural 2 27 LOC5512977 0.83 9.0 79.7% feature · violin
Neural 2 28 LOC5512606 1.95 8.9 31.0% feature · violin
Neural 2 29 LOC116619142 2.47 8.6 31.7% feature · violin
Neural 2 30 LOC116613477 3.14 8.4 24.8% feature · violin
Neural 2 31 LOC5521019 0.80 7.8 71.2% feature · violin
Neural 2 32 LOC5503451 1.88 7.7 29.2% feature · violin
Neural 2 33 LOC116614813 0.82 7.6 55.9% feature · violin
Neural 2 34 LOC5510112 0.85 7.6 55.6% feature · violin
Neural 2 35 LOC5518052 1.20 7.5 37.9% feature · violin
Neural 2 36 LOC5501029 1.23 7.3 36.0% feature · violin
Neural 2 37 LOC5522037 1.62 7.1 36.0% feature · violin
Neural 2 38 LOC5508341 1.78 7.1 25.4% feature · violin
Neural 2 39 LOC5506166 2.24 7.1 32.0% feature · violin
Neural 2 40 LOC5520117 1.18 7.0 37.8% feature · violin
Neural 2 41 LOC5519443 0.83 7.0 51.2% feature · violin
Neural 2 42 LOC5515391 0.66 6.8 68.6% feature · violin
Neural 2 43 LOC5513639 1.01 6.7 40.2% feature · violin
Neural 2 44 LOC5512534 4.20 6.6 16.5% feature · violin
Neural 2 45 LOC5519231 0.67 6.4 58.9% feature · violin
Neural 2 46 LOC116613923 1.87 6.4 28.1% feature · violin
Neural 2 47 LOC5503649 0.56 6.4 67.6% feature · violin
Neural 2 48 LOC5509069 1.10 6.3 33.6% feature · violin
Neural 2 49 LOC5506178 0.83 6.3 42.3% feature · violin
Neural 2 50 LOC116613924 2.67 6.3 22.3% feature · violin
TOP