Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Neural 13348 Secretory2054 Gastrodermis1760 Progenitor904 Epidermis780 Neural 2723 Neural 4486 Secretory - Mucous cells447 Neural 3351 Undetermined319 Developing cnidocytes300 Neural 0153 Muscle117

Showing the cell type that LOC5512306 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Secretory - Mucous cells 1 XP_048579463.1 (LOC5516164) 6.75 35.3 99.3% feature · violin
Secretory - Mucous cells 2 LOC116604644 not mapped 6.60 35.2 99.3% feature · violin
Secretory - Mucous cells 3 XP_032236645.1 (LOC5511406) 6.40 33.2 95.5% feature · violin
Secretory - Mucous cells 4 XP_048588150.1 (LOC116614929) 5.78 33.0 95.5% feature · violin
Secretory - Mucous cells 5 XP_032221439.2 (LOC116603920) 5.99 32.8 95.1% feature · violin
Secretory - Mucous cells 6 XP_032242610.1 (LOC5516832) 6.57 32.6 94.4% feature · violin
Secretory - Mucous cells 7 XP_032234772.1 (LOC5509865) 4.87 30.0 89.9% feature · violin
Secretory - Mucous cells 8 XP_032239673.2 (LOC116619232) 5.92 29.7 87.9% feature · violin
Secretory - Mucous cells 9 XP_048581323.1 (LOC116602193) 5.41 23.2 68.2% feature · violin
Secretory - Mucous cells 10 LOC116617940 not mapped 5.68 22.4 65.1% feature · violin
Secretory - Mucous cells 11 XP_001629392.2 (LOC5508829) 5.36 21.6 63.3% feature · violin
Secretory - Mucous cells 12 XP_032220211.2 (LOC5519457) 3.11 20.7 74.5% feature · violin
Secretory - Mucous cells 13 XP_001632669.1 (LOC5512306) 2.23 20.1 86.1% feature · violin
Secretory - Mucous cells 14 XP_032220441.2 (LOC116603409) 5.23 19.9 58.6% feature · violin
Secretory - Mucous cells 15 XP_032238340.2 (LOC116618571) 4.52 19.5 62.9% feature · violin
Secretory - Mucous cells 16 XP_032232822.1 (LOC116615375) 3.79 19.1 61.5% feature · violin
Secretory - Mucous cells 17 XP_048587058.1 (LOC5519341) 4.56 17.8 53.9% feature · violin
Secretory - Mucous cells 18 XP_032241422.2 (LOC5515796) 3.71 17.7 61.1% feature · violin
Secretory - Mucous cells 19 XP_001625447.3 (LOC5504530) 5.23 17.5 51.2% feature · violin
Secretory - Mucous cells 20 XP_048580714.1 (LOC5502365) 2.97 17.4 62.0% feature · violin
Secretory - Mucous cells 21 XP_048581624.1 (LOC5519972) 3.61 15.9 50.6% feature · violin
Secretory - Mucous cells 22 XP_032222578.1 (LOC5521433) 2.40 15.8 63.3% feature · violin
Secretory - Mucous cells 23 XP_001629735.1 (LOC5509197) 1.58 15.5 84.3% feature · violin
Secretory - Mucous cells 24 XP_032237946.2 (LOC5512587) 1.39 15.5 89.7% feature · violin
Secretory - Mucous cells 25 XP_048585590.1 (LOC5508345) 4.46 15.1 45.4% feature · violin
Secretory - Mucous cells 26 XP_032240081.2 (LOC5514659) 5.64 14.7 42.3% feature · violin
Secretory - Mucous cells 27 XP_001639131.1 (LOC5519153) 0.93 14.0 96.0% feature · violin
Secretory - Mucous cells 28 XP_048582062.1 (LOC5519563) 3.05 13.8 47.2% feature · violin
Secretory - Mucous cells 29 XP_048581179.1 (LOC5511287) 1.60 13.8 77.4% feature · violin
Secretory - Mucous cells 30 XP_048580691.1 (LOC5512585) 5.51 13.8 39.8% feature · violin
Secretory - Mucous cells 31 XP_048586180.1 (LOC5509690) 3.71 13.6 43.8% feature · violin
Secretory - Mucous cells 32 XP_001632655.2 (LOC5512294) 5.07 13.6 39.6% feature · violin
Secretory - Mucous cells 33 XP_001639806.1 (LOC5519847) 1.33 13.5 87.2% feature · violin
Secretory - Mucous cells 34 XP_032238357.2 (LOC116618583) 0.60 13.2 100.0% feature · violin
Secretory - Mucous cells 35 XP_001626294.2 (LOC5505446) 0.84 13.0 97.8% feature · violin
Secretory - Mucous cells 36 XP_001636296.1 (LOC5516213) 1.58 12.5 68.2% feature · violin
Secretory - Mucous cells 37 XP_001634593.1 (LOC5514410) 2.17 12.5 52.6% feature · violin
Secretory - Mucous cells 38 XP_048585822.1 (LOC5514933) 3.19 11.9 39.1% feature · violin
Secretory - Mucous cells 39 XP_032221686.2 (LOC116604031) 1.68 11.8 60.4% feature · violin
Secretory - Mucous cells 40 XP_001630264.2 (LOC5509762) 2.24 11.8 47.4% feature · violin
Secretory - Mucous cells 41 XP_001638406.1 (LOC5518447) 1.33 11.3 72.5% feature · violin
Secretory - Mucous cells 42 XP_048580248.1 (LOC5514309) 1.43 11.3 65.5% feature · violin
Secretory - Mucous cells 43 XP_032220681.2 (LOC5519765) 4.87 11.3 33.8% feature · violin
Secretory - Mucous cells 44 XP_001635890.2 (LOC5515699) 1.18 11.0 77.6% feature · violin
Secretory - Mucous cells 45 XP_001628734.1 (LOC5508119) 1.11 10.8 82.1% feature · violin
Secretory - Mucous cells 46 XP_032218294.2 (LOC5517864) 4.96 10.6 30.9% feature · violin
Secretory - Mucous cells 47 XP_048580195.1 (LOC116619926) 2.28 10.5 40.5% feature · violin
Secretory - Mucous cells 48 XP_032218833.1 (LOC116601977) 2.15 10.5 43.0% feature · violin
Secretory - Mucous cells 49 XP_001633869.2 (LOC5513658) 2.09 10.4 43.8% feature · violin
Secretory - Mucous cells 50 XP_001629439.3 (LOC5508858) 2.18 10.4 42.5% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 2 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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