Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that LOC5514181 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Gastrodermis 1 LOC5502507 4.75 63.6 99.9% feature · violin
Gastrodermis 2 LOC5503261 5.19 60.7 96.1% feature · violin
Gastrodermis 3 LOC5516389 3.90 52.6 91.9% feature · violin
Gastrodermis 4 LOC5510121 2.11 51.7 99.9% feature · violin
Gastrodermis 5 LOC5520433 3.63 51.2 91.2% feature · violin
Gastrodermis 6 LOC5514760 2.99 50.3 94.3% feature · violin
Gastrodermis 7 LOC5508693 3.75 50.0 89.3% feature · violin
Gastrodermis 8 LOC5510701 3.38 46.7 86.1% feature · violin
Gastrodermis 9 LOC5508470 3.46 45.5 83.9% feature · violin
Gastrodermis 10 LOC5514101 3.46 45.1 85.3% feature · violin
Gastrodermis 11 LOC5509848 3.68 44.7 80.5% feature · violin
Gastrodermis 12 LOC5514182 3.43 43.6 80.8% feature · violin
Gastrodermis 13 LOC5514802 3.44 43.2 81.5% feature · violin
Gastrodermis 14 LOC5511666 0.98 41.3 99.7% feature · violin
Gastrodermis 15 LOC5509651 2.84 41.0 83.5% feature · violin
Gastrodermis 16 LOC5521757 3.42 39.0 72.7% feature · violin
Gastrodermis 17 LOC5499548 2.54 38.3 83.2% feature · violin
Gastrodermis 18 LOC5514181 3.35 38.2 71.0% feature · violin
Gastrodermis 19 LOC5518574 3.60 38.1 67.3% feature · violin
Gastrodermis 20 LOC116616109 3.48 37.3 66.8% feature · violin
Gastrodermis 21 LOC5521944 3.41 36.9 66.5% feature · violin
Gastrodermis 22 LOC5510061 3.44 36.4 65.7% feature · violin
Gastrodermis 23 LOC5505945 3.62 35.5 62.3% feature · violin
Gastrodermis 24 LOC5521826 2.50 34.3 77.8% feature · violin
Gastrodermis 25 LOC116602249 2.32 33.7 77.8% feature · violin
Gastrodermis 26 LOC116610739 3.40 33.1 59.2% feature · violin
Gastrodermis 27 LOC5507355 2.46 32.9 76.0% feature · violin
Gastrodermis 28 LOC5516589 3.10 32.5 64.1% feature · violin
Gastrodermis 29 LOC5506699 2.81 32.0 68.2% feature · violin
Gastrodermis 30 LOC5519329 3.23 31.9 58.2% feature · violin
Gastrodermis 31 LOC5510177 2.37 30.8 68.3% feature · violin
Gastrodermis 32 LOC5501596 2.49 30.6 76.9% feature · violin
Gastrodermis 33 LOC5519318 2.28 30.0 67.4% feature · violin
Gastrodermis 34 LOC5514130 3.28 30.0 54.2% feature · violin
Gastrodermis 35 LOC5505434 1.39 29.9 90.1% feature · violin
Gastrodermis 36 LOC5508471 3.17 29.5 54.2% feature · violin
Gastrodermis 37 LOC5502352 2.25 29.4 69.8% feature · violin
Gastrodermis 38 LOC116601122 2.55 29.3 64.5% feature · violin
Gastrodermis 39 LOC5514355 2.52 29.2 64.1% feature · violin
Gastrodermis 40 LOC116619953 3.00 28.9 54.3% feature · violin
Gastrodermis 41 LOC125556802 2.59 28.9 59.3% feature · violin
Gastrodermis 42 LOC5508577 2.56 28.6 59.5% feature · violin
Gastrodermis 43 LOC5519412 1.19 28.2 94.8% feature · violin
Gastrodermis 44 LOC5514632 2.57 27.7 55.9% feature · violin
Gastrodermis 45 LOC5516909 2.16 27.6 67.3% feature · violin
Gastrodermis 46 LOC5508059 3.01 27.6 50.9% feature · violin
Gastrodermis 47 LOC5519886 3.13 27.4 49.9% feature · violin
Gastrodermis 48 LOC5518854 2.72 27.3 59.7% feature · violin
Gastrodermis 49 LOC5520815 1.09 26.7 94.0% feature · violin
Gastrodermis 50 LOC5513482 2.10 26.4 61.9% feature · violin
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