Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g009989000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 18 1 NV2g011801000.1 7.28 31.6 99.2% feature · violin
Cluster 18 2 NV2g018311000.1 7.06 31.3 99.5% feature · violin
Cluster 18 3 NV2g011815000.1 7.06 31.3 100.0% feature · violin
Cluster 18 4 NV2g009746000.1 6.88 31.1 99.2% feature · violin
Cluster 18 5 NV2g025695000.1 6.84 31.0 99.5% feature · violin
Cluster 18 6 NV2g010927000.1 6.84 30.9 98.7% feature · violin
Cluster 18 7 NV2g020021000.1 6.55 30.8 98.4% feature · violin
Cluster 18 8 NV2g020489000.1 6.46 30.6 98.9% feature · violin
Cluster 18 9 NV2g010686000.1 6.71 30.5 99.7% feature · violin
Cluster 18 10 NV2g012623000.1 6.23 30.1 96.8% feature · violin
Cluster 18 11 NV2g012621000.1 6.27 30.0 96.6% feature · violin
Cluster 18 12 NV2g006716000.1 6.24 29.5 95.5% feature · violin
Cluster 18 13 NV2g011721000.1 5.92 29.3 97.1% feature · violin
Cluster 18 14 NV2g001925000.1 5.93 29.3 94.2% feature · violin
Cluster 18 15 NV2g009990000.1 6.44 29.2 91.8% feature · violin
Cluster 18 16 NV2g004235000.1 6.02 29.1 93.9% feature · violin
Cluster 18 17 NV2g011814000.1 6.03 29.1 92.9% feature · violin
Cluster 18 18 NV2g010343000.1 6.11 29.0 92.9% feature · violin
Cluster 18 19 NV2g011816000.1 6.03 29.0 95.8% feature · violin
Cluster 18 20 NV2g005200000.1 5.68 29.0 96.6% feature · violin
Cluster 18 21 NV2g023281000.1 6.26 27.9 88.1% feature · violin
Cluster 18 22 NV2g000975000.1 5.63 27.7 89.9% feature · violin
Cluster 18 23 NV2g017392000.1 5.78 27.5 88.4% feature · violin
Cluster 18 24 NV2g011821000.1 5.18 27.5 93.7% feature · violin
Cluster 18 25 NV2g011233000.1 6.18 27.3 86.2% feature · violin
Cluster 18 26 NV2g001851000.1 5.10 27.2 90.2% feature · violin
Cluster 18 27 NV2g010332000.1 5.99 26.8 84.9% feature · violin
Cluster 18 28 NV2g023668000.1 5.42 26.7 87.3% feature · violin
Cluster 18 29 NV2g013382000.1 5.45 26.0 85.2% feature · violin
Cluster 18 30 NV2g011720000.1 4.98 26.0 88.6% feature · violin
Cluster 18 31 NV2g024598000.1 5.67 25.9 82.3% feature · violin
Cluster 18 32 NV2g018480000.1 5.06 25.6 85.4% feature · violin
Cluster 18 33 NV2g017352000.1 5.57 25.6 82.0% feature · violin
Cluster 18 34 NV2g009885000.1 5.60 25.1 79.9% feature · violin
Cluster 18 35 NV2g009989000.1 5.92 25.0 78.8% feature · violin
Cluster 18 36 NV2g003555000.1 5.65 24.9 79.1% feature · violin
Cluster 18 37 NV2g014847000.1 5.43 24.7 79.4% feature · violin
Cluster 18 38 NV2g009534000.1 4.41 24.5 85.4% feature · violin
Cluster 18 39 NV2g021461000.1 3.58 24.5 86.8% feature · violin
Cluster 18 40 NV2g017723000.1 5.43 24.4 78.3% feature · violin
Cluster 18 41 NV2g010077000.1 5.35 24.3 78.8% feature · violin
Cluster 18 42 NV2g022454000.1 6.15 24.2 75.9% feature · violin
Cluster 18 43 NV2g017003000.1 5.17 24.2 78.8% feature · violin
Cluster 18 44 NV2g024797000.1 3.17 24.2 93.9% feature · violin
Cluster 18 45 NV2g017017000.1 5.67 23.8 75.4% feature · violin
Cluster 18 46 NV2g008976000.1 5.64 23.8 75.4% feature · violin
Cluster 18 47 NV2g010006000.1 5.06 23.8 77.5% feature · violin
Cluster 18 48 NV2g009738000.1 5.70 23.6 74.9% feature · violin
Cluster 18 49 NV2g011825000.1 4.84 23.6 78.8% feature · violin
Cluster 18 50 NV2g011723000.1 4.95 23.3 77.8% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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