Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g010927000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 17 1 NV2g009746000.1 7.05 39.8 96.7% feature · violin
Cluster 17 2 NV2g011815000.1 7.01 39.6 97.8% feature · violin
Cluster 17 3 NV2g018311000.1 7.16 39.6 96.0% feature · violin
Cluster 17 4 NV2g011816000.1 7.02 38.1 92.9% feature · violin
Cluster 17 5 NV2g025695000.1 6.77 38.1 93.8% feature · violin
Cluster 17 6 NV2g010927000.1 6.68 37.8 93.2% feature · violin
Cluster 17 7 NV2g011721000.1 6.39 37.3 92.4% feature · violin
Cluster 17 8 NV2g011801000.1 6.39 36.7 92.2% feature · violin
Cluster 17 9 NV2g012621000.1 5.80 34.3 86.5% feature · violin
Cluster 17 10 NV2g005192000.1 7.58 34.3 82.5% feature · violin
Cluster 17 11 NV2g020021000.1 5.52 34.2 89.0% feature · violin
Cluster 17 12 NV2g005200000.1 5.57 33.6 85.6% feature · violin
Cluster 17 13 NV2g012623000.1 5.84 33.6 84.0% feature · violin
Cluster 17 14 NV2g020489000.1 5.43 32.8 85.3% feature · violin
Cluster 17 15 NV2g011821000.1 5.36 32.7 83.6% feature · violin
Cluster 17 16 NV2g010686000.1 4.99 32.4 92.4% feature · violin
Cluster 17 17 NV2g011723000.1 6.43 32.3 78.3% feature · violin
Cluster 17 18 NV2g001925000.1 5.46 31.7 79.2% feature · violin
Cluster 17 19 NV2g023281000.1 5.98 30.4 74.1% feature · violin
Cluster 17 20 NV2g010343000.1 5.60 30.3 75.2% feature · violin
Cluster 17 21 NV2g001851000.1 4.93 30.1 77.2% feature · violin
Cluster 17 22 NV2g011720000.1 5.05 29.9 76.9% feature · violin
Cluster 17 23 NV2g000975000.1 4.95 28.7 73.5% feature · violin
Cluster 17 24 NV2g020491000.1 6.15 28.1 68.1% feature · violin
Cluster 17 25 NV2g005194000.1 6.50 27.7 66.0% feature · violin
Cluster 17 26 NV2g020325000.1 6.56 27.1 64.7% feature · violin
Cluster 17 27 NV2g011814000.1 4.72 25.6 65.9% feature · violin
Cluster 17 28 NV2g010077000.1 5.19 25.4 63.3% feature · violin
Cluster 17 29 NV2g017352000.1 5.07 25.2 62.8% feature · violin
Cluster 17 30 NV2g017003000.1 4.94 25.0 62.8% feature · violin
Cluster 17 31 NV2g009534000.1 4.54 24.9 65.9% feature · violin
Cluster 17 32 NV2g010006000.1 4.74 24.2 61.2% feature · violin
Cluster 17 33 NV2g010332000.1 5.22 24.0 59.5% feature · violin
Cluster 17 34 NV2g022547000.1 1.18 23.8 96.4% feature · violin
Cluster 17 35 NV2g009990000.1 4.57 23.8 61.2% feature · violin
Cluster 17 36 NV2g013382000.1 4.40 23.1 60.5% feature · violin
Cluster 17 37 NV2g012788000.1 5.51 22.9 55.8% feature · violin
Cluster 17 38 NV2g022454000.1 5.55 22.5 54.7% feature · violin
Cluster 17 39 NV2g011233000.1 4.76 21.9 55.5% feature · violin
Cluster 17 40 NV2g023668000.1 3.82 21.8 60.2% feature · violin
Cluster 17 41 NV2g010004000.1 4.94 21.3 52.9% feature · violin
Cluster 17 42 NV2g010388000.1 5.10 21.2 52.2% feature · violin
Cluster 17 43 NV2g006716000.1 3.47 21.1 62.3% feature · violin
Cluster 17 44 NV2g024308000.1 6.97 21.0 49.8% feature · violin
Cluster 17 45 NV2g021461000.1 2.71 21.0 67.6% feature · violin
Cluster 17 46 NV2g013045000.1 3.90 20.8 55.8% feature · violin
Cluster 17 47 NV2g008976000.1 4.97 20.8 51.5% feature · violin
Cluster 17 48 NV2g021582000.1 4.61 20.7 52.2% feature · violin
Cluster 17 49 NV2g021273000.1 5.59 20.6 49.8% feature · violin
Cluster 17 50 NV2g015283000.1 4.91 20.2 50.4% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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