Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g012706000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 21 1 NV2g001200000.1 6.53 34.5 93.5% feature · violin
Cluster 21 2 NV2g005216000.1 6.85 33.4 93.1% feature · violin
Cluster 21 3 NV2g023192000.1 7.48 32.8 86.4% feature · violin
Cluster 21 4 NV2g016299000.1 7.46 31.9 84.6% feature · violin
Cluster 21 5 NV2g014774000.1 7.50 30.5 80.8% feature · violin
Cluster 21 6 NV2g007089000.1 4.47 27.9 81.6% feature · violin
Cluster 21 7 NV2g025136000.1 6.98 27.2 71.6% feature · violin
Cluster 21 8 NV2g014348000.1 3.99 24.9 75.6% feature · violin
Cluster 21 9 NV2g004529000.1 5.16 24.7 68.1% feature · violin
Cluster 21 10 NV2g003856000.1 4.54 24.3 70.6% feature · violin
Cluster 21 11 NV2g012847000.1 6.60 23.9 63.3% feature · violin
Cluster 21 12 NV2g019851000.1 6.22 22.8 60.7% feature · violin
Cluster 21 13 NV2g005875000.1 7.63 22.8 59.5% feature · violin
Cluster 21 14 NV2g017939000.1 5.32 22.4 62.0% feature · violin
Cluster 21 15 NV2g012706000.1 5.07 21.4 59.3% feature · violin
Cluster 21 16 NV2g017740000.1 3.55 20.1 63.3% feature · violin
Cluster 21 17 NV2g012705000.1 5.32 20.1 54.9% feature · violin
Cluster 21 18 NV2g015163000.1 6.54 20.0 52.8% feature · violin
Cluster 21 19 NV2g020761000.1 1.33 20.0 96.4% feature · violin
Cluster 21 20 NV2g016897000.1 3.51 19.7 62.0% feature · violin
Cluster 21 21 NV2g015189000.1 7.64 19.7 51.4% feature · violin
Cluster 21 22 NV2g011600000.1 6.63 19.6 51.6% feature · violin
Cluster 21 23 NV2g017961000.1 2.62 18.6 71.4% feature · violin
Cluster 21 24 NV2g009665000.1 5.12 18.4 50.1% feature · violin
Cluster 21 25 NV2g025294000.1 7.39 18.3 47.8% feature · violin
Cluster 21 26 NV2g003243000.1 2.04 17.9 74.3% feature · violin
Cluster 21 27 NV2g024331000.1 6.20 17.4 46.1% feature · violin
Cluster 21 28 NV2g001202000.1 4.70 17.2 49.3% feature · violin
Cluster 21 29 NV2g013538000.1 1.47 17.1 82.1% feature · violin
Cluster 21 30 NV2g000252000.1 4.60 17.0 47.8% feature · violin
Cluster 21 31 NV2g013752000.1 5.70 16.9 44.9% feature · violin
Cluster 21 32 NV2g004212000.1 1.70 16.6 76.4% feature · violin
Cluster 21 33 NV2g003318000.1 4.58 16.3 45.5% feature · violin
Cluster 21 34 NV2g016367000.1 2.87 16.0 56.6% feature · violin
Cluster 21 35 NV2g001086000.1 5.69 15.1 40.1% feature · violin
Cluster 21 36 NV2g023614000.1 3.81 15.1 47.4% feature · violin
Cluster 21 37 NV2g003783000.1 2.33 14.9 58.2% feature · violin
Cluster 21 38 NV2g019361000.1 6.31 14.7 39.0% feature · violin
Cluster 21 39 NV2g015747000.1 6.02 14.4 38.4% feature · violin
Cluster 21 40 NV2g002719000.1 6.40 14.3 37.4% feature · violin
Cluster 21 41 NV2g012875000.1 6.97 14.2 37.0% feature · violin
Cluster 21 42 NV2g004362000.1 6.14 14.0 36.9% feature · violin
Cluster 21 43 NV2g003917000.1 6.43 13.8 36.3% feature · violin
Cluster 21 44 NV2g016823000.1 7.33 13.7 35.7% feature · violin
Cluster 21 45 NV2g001814000.1 1.90 13.7 59.5% feature · violin
Cluster 21 46 NV2g018682000.1 2.82 13.6 46.6% feature · violin
Cluster 21 47 NV2g025615000.1 3.31 13.5 42.0% feature · violin
Cluster 21 48 NV2g003319000.1 4.11 13.4 38.4% feature · violin
Cluster 21 49 NV2g007246000.1 1.92 13.3 58.5% feature · violin
Cluster 21 50 NV2g024576000.1 0.93 12.9 94.6% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

TOP