Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g017877000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 24 1 NV2g000363000.1 5.57 17.4 91.2% feature · violin
Cluster 24 2 NV2g017877000.1 6.23 17.2 85.8% feature · violin
Cluster 24 3 NV2g002652000.1 4.98 16.6 88.5% feature · violin
Cluster 24 4 NV2g018831000.1 7.36 15.6 75.7% feature · violin
Cluster 24 5 NV2g018482000.1 5.70 15.6 78.4% feature · violin
Cluster 24 6 NV2g016402000.1 3.93 14.8 81.8% feature · violin
Cluster 24 7 NV2g025991000.1 6.03 14.5 71.6% feature · violin
Cluster 24 8 NV2g002966000.1 4.57 14.2 75.0% feature · violin
Cluster 24 9 NV2g008421000.1 5.24 14.2 72.3% feature · violin
Cluster 24 10 NV2g013885000.1 4.47 13.9 75.7% feature · violin
Cluster 24 11 NV2g004684000.1 5.23 13.2 66.9% feature · violin
Cluster 24 12 NV2g000932000.1 5.21 13.0 66.2% feature · violin
Cluster 24 13 NV2g010686000.1 3.57 12.4 85.8% feature · violin
Cluster 24 14 NV2g013045000.1 3.73 12.3 69.6% feature · violin
Cluster 24 15 NV2g009935000.1 3.31 11.0 64.9% feature · violin
Cluster 24 16 NV2g009336000.1 3.87 10.5 56.8% feature · violin
Cluster 24 17 NV2g016803000.1 1.55 10.5 86.5% feature · violin
Cluster 24 18 NV2g014792000.1 1.07 10.4 93.2% feature · violin
Cluster 24 19 NV2g023131000.1 4.06 10.2 54.7% feature · violin
Cluster 24 20 NV2g023247000.1 5.06 10.2 51.4% feature · violin
Cluster 24 21 NV2g013986000.1 1.52 10.1 88.5% feature · violin
Cluster 24 22 NV2g007089000.1 2.64 10.0 66.2% feature · violin
Cluster 24 23 NV2g018394000.1 3.38 9.9 56.1% feature · violin
Cluster 24 24 NV2g005735000.1 0.92 9.8 97.3% feature · violin
Cluster 24 25 NV2g003291000.1 1.03 9.7 93.2% feature · violin
Cluster 24 26 NV2g000010000.1 1.28 9.7 92.6% feature · violin
Cluster 24 27 NV2g025210000.1 1.12 9.7 96.6% feature · violin
Cluster 24 28 NV2g011038000.1 0.71 9.7 98.6% feature · violin
Cluster 24 29 NV2g014187000.1 2.21 9.5 71.6% feature · violin
Cluster 24 30 NV2g008759000.1 1.80 9.5 75.7% feature · violin
Cluster 24 31 NV2g016964000.1 2.06 9.4 77.0% feature · violin
Cluster 24 32 NV2g023669000.1 1.77 9.4 83.1% feature · violin
Cluster 24 33 NV2g010277000.1 1.28 9.3 87.2% feature · violin
Cluster 24 34 NV2g018480000.1 3.09 9.3 56.1% feature · violin
Cluster 24 35 NV2g007087000.1 2.38 9.3 64.2% feature · violin
Cluster 24 36 NV2g000919000.1 3.70 9.3 50.0% feature · violin
Cluster 24 37 NV2g022721000.1 5.70 9.2 45.3% feature · violin
Cluster 24 38 NV2g015684000.1 0.99 9.2 95.3% feature · violin
Cluster 24 39 NV2g020276000.1 2.54 9.2 59.5% feature · violin
Cluster 24 40 NV2g012641000.1 3.65 9.2 49.3% feature · violin
Cluster 24 41 NV2g023809000.1 1.56 9.2 84.5% feature · violin
Cluster 24 42 NV2g003783000.1 2.26 9.1 66.9% feature · violin
Cluster 24 43 NV2g011574000.1 0.86 9.1 92.6% feature · violin
Cluster 24 44 NV2g014259000.1 2.93 9.1 54.7% feature · violin
Cluster 24 45 NV2g024396000.1 0.89 9.1 95.9% feature · violin
Cluster 24 46 NV2g011191000.1 1.79 9.0 77.7% feature · violin
Cluster 24 47 NV2g019878000.1 2.82 9.0 55.4% feature · violin
Cluster 24 48 NV2g005137000.1 4.39 9.0 45.9% feature · violin
Cluster 24 49 NV2g016227000.1 3.64 8.9 48.0% feature · violin
Cluster 24 50 NV2g012028000.1 1.18 8.9 91.9% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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