Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g020021000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 10 1 NV2g010686000.1 6.74 42.6 98.9% feature · violin
Cluster 10 2 NV2g006716000.1 6.47 40.7 93.2% feature · violin
Cluster 10 3 NV2g020021000.1 5.64 37.7 91.0% feature · violin
Cluster 10 4 NV2g011815000.1 5.04 37.0 95.6% feature · violin
Cluster 10 5 NV2g002652000.1 5.65 35.7 81.8% feature · violin
Cluster 10 6 NV2g004235000.1 5.91 35.1 80.8% feature · violin
Cluster 10 7 NV2g018480000.1 5.75 34.5 79.2% feature · violin
Cluster 10 8 NV2g020489000.1 5.12 34.2 84.2% feature · violin
Cluster 10 9 NV2g005200000.1 4.96 33.4 82.6% feature · violin
Cluster 10 10 NV2g000363000.1 5.45 33.1 78.0% feature · violin
Cluster 10 11 NV2g011821000.1 4.82 33.0 81.6% feature · violin
Cluster 10 12 NV2g025695000.1 4.87 32.5 82.6% feature · violin
Cluster 10 13 NV2g011801000.1 4.93 32.3 81.6% feature · violin
Cluster 10 14 NV2g009534000.1 4.83 31.8 76.9% feature · violin
Cluster 10 15 NV2g000954000.1 1.94 31.1 94.1% feature · violin
Cluster 10 16 NV2g023668000.1 4.88 31.1 74.7% feature · violin
Cluster 10 17 NV2g018052000.1 6.52 30.8 68.6% feature · violin
Cluster 10 18 NV2g011825000.1 5.17 30.7 72.0% feature · violin
Cluster 10 19 NV2g023669000.1 2.80 30.5 85.9% feature · violin
Cluster 10 20 NV2g001169000.1 3.05 30.4 83.9% feature · violin
Cluster 10 21 NV2g003783000.1 3.97 30.2 76.3% feature · violin
Cluster 10 22 NV2g011720000.1 4.45 30.1 75.6% feature · violin
Cluster 10 23 NV2g024797000.1 3.03 30.0 85.0% feature · violin
Cluster 10 24 NV2g023423000.1 5.26 29.8 69.2% feature · violin
Cluster 10 25 NV2g009746000.1 4.12 29.6 79.2% feature · violin
Cluster 10 26 NV2g012621000.1 4.30 28.8 74.1% feature · violin
Cluster 10 27 NV2g004511000.1 5.91 28.3 63.8% feature · violin
Cluster 10 28 NV2g012623000.1 4.36 28.1 71.2% feature · violin
Cluster 10 29 NV2g000975000.1 4.36 27.7 68.9% feature · violin
Cluster 10 30 NV2g023597000.1 2.76 27.7 78.7% feature · violin
Cluster 10 31 NV2g016021000.1 5.87 27.4 61.4% feature · violin
Cluster 10 32 NV2g013045000.1 4.40 27.0 65.4% feature · violin
Cluster 10 33 NV2g011721000.1 3.60 27.0 75.3% feature · violin
Cluster 10 34 NV2g017392000.1 4.36 26.6 65.4% feature · violin
Cluster 10 35 NV2g016606000.1 3.22 26.4 71.8% feature · violin
Cluster 10 36 NV2g000010000.1 1.62 26.4 88.3% feature · violin
Cluster 10 37 NV2g012028000.1 1.63 26.3 90.9% feature · violin
Cluster 10 38 NV2g011814000.1 4.31 26.2 64.5% feature · violin
Cluster 10 39 NV2g017877000.1 4.62 25.2 59.9% feature · violin
Cluster 10 40 NV2g012154000.1 1.70 25.1 84.7% feature · violin
Cluster 10 41 NV2g013986000.1 1.74 25.1 84.0% feature · violin
Cluster 10 42 NV2g018585000.1 4.73 24.9 58.4% feature · violin
Cluster 10 43 NV2g017723000.1 4.79 24.7 57.9% feature · violin
Cluster 10 44 NV2g006786000.1 5.52 24.7 55.9% feature · violin
Cluster 10 45 NV2g000900000.1 2.85 24.2 69.4% feature · violin
Cluster 10 46 NV2g001851000.1 3.55 24.0 64.2% feature · violin
Cluster 10 47 NV2g009885000.1 4.73 23.9 56.0% feature · violin
Cluster 10 48 NV2g018311000.1 3.46 23.9 66.5% feature · violin
Cluster 10 49 NV2g010707000.1 4.71 23.4 54.6% feature · violin
Cluster 10 50 NV2g005138000.1 5.11 23.3 53.4% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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