Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g022761000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 22 1 NV2g005192000.1 6.84 9.8 100.0% feature · violin
Cluster 22 2 NV2g008609000.1 5.19 9.2 100.0% feature · violin
Cluster 22 3 NV2g003667000.1 4.77 9.1 100.0% feature · violin
Cluster 22 4 NV2g016827000.1 4.99 9.1 94.4% feature · violin
Cluster 22 5 NV2g011816000.1 5.10 9.1 100.0% feature · violin
Cluster 22 6 NV2g005277000.1 3.19 8.9 100.0% feature · violin
Cluster 22 7 NV2g011564000.1 5.27 8.8 100.0% feature · violin
Cluster 22 8 NV2g010927000.1 4.86 8.8 100.0% feature · violin
Cluster 22 9 NV2g009746000.1 5.08 8.8 100.0% feature · violin
Cluster 22 10 NV2g012904000.1 4.50 8.8 97.2% feature · violin
Cluster 22 11 NV2g022761000.1 2.22 8.8 100.0% feature · violin
Cluster 22 12 NV2g011815000.1 5.17 8.8 100.0% feature · violin
Cluster 22 13 NV2g005699000.1 3.55 8.7 100.0% feature · violin
Cluster 22 14 NV2g006785000.1 4.55 8.6 100.0% feature · violin
Cluster 22 15 NV2g012621000.1 4.44 8.6 100.0% feature · violin
Cluster 22 16 NV2g003425000.1 4.09 8.6 100.0% feature · violin
Cluster 22 17 NV2g018311000.1 4.52 8.4 97.2% feature · violin
Cluster 22 18 NV2g016121000.1 1.92 8.3 100.0% feature · violin
Cluster 22 19 NV2g020491000.1 4.64 8.3 88.9% feature · violin
Cluster 22 20 NV2g011721000.1 4.53 8.3 97.2% feature · violin
Cluster 22 21 NV2g001785000.1 3.30 8.1 97.2% feature · violin
Cluster 22 22 NV2g011801000.1 4.20 8.1 97.2% feature · violin
Cluster 22 23 NV2g009154000.1 3.06 8.0 100.0% feature · violin
Cluster 22 24 NV2g009834000.1 4.56 7.9 83.3% feature · violin
Cluster 22 25 NV2g022454000.1 4.56 7.9 83.3% feature · violin
Cluster 22 26 NV2g003583000.1 4.78 7.9 83.3% feature · violin
Cluster 22 27 NV2g020404000.1 1.53 7.8 100.0% feature · violin
Cluster 22 28 NV2g003891000.1 2.92 7.8 100.0% feature · violin
Cluster 22 29 NV2g025695000.1 3.73 7.8 97.2% feature · violin
Cluster 22 30 NV2g010332000.1 4.45 7.7 83.3% feature · violin
Cluster 22 31 NV2g008437000.1 4.49 7.7 80.6% feature · violin
Cluster 22 32 NV2g005200000.1 4.20 7.6 91.7% feature · violin
Cluster 22 33 NV2g001851000.1 3.58 7.6 91.7% feature · violin
Cluster 22 34 NV2g016504000.1 3.41 7.6 88.9% feature · violin
Cluster 22 35 NV2g020205000.1 2.65 7.5 100.0% feature · violin
Cluster 22 36 NV2g020489000.1 3.55 7.5 94.4% feature · violin
Cluster 22 37 NV2g020054000.1 2.26 7.5 100.0% feature · violin
Cluster 22 38 NV2g001925000.1 3.68 7.5 88.9% feature · violin
Cluster 22 39 NV2g022973000.1 4.84 7.5 77.8% feature · violin
Cluster 22 40 NV2g003261000.1 4.38 7.5 80.6% feature · violin
Cluster 22 41 NV2g004721000.1 3.42 7.5 88.9% feature · violin
Cluster 22 42 NV2g003337000.1 2.66 7.5 97.2% feature · violin
Cluster 22 43 NV2g001724000.1 2.89 7.4 97.2% feature · violin
Cluster 22 44 NV2g011723000.1 4.11 7.4 83.3% feature · violin
Cluster 22 45 NV2g011720000.1 3.36 7.4 91.7% feature · violin
Cluster 22 46 NV2g001969000.1 2.36 7.4 100.0% feature · violin
Cluster 22 47 NV2g023281000.1 4.29 7.3 80.6% feature · violin
Cluster 22 48 NV2g010343000.1 4.01 7.3 83.3% feature · violin
Cluster 22 49 NV2g009832000.1 4.77 7.3 75.0% feature · violin
Cluster 22 50 NV2g020021000.1 3.36 7.2 94.4% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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