Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g023940000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 14 1 NV2g004239000.1 3.37 18.8 74.5% feature · violin
Cluster 14 2 NV2g004762000.1 5.91 17.0 55.0% feature · violin
Cluster 14 3 NV2g025216000.1 3.01 16.5 69.9% feature · violin
Cluster 14 4 NV2g023156000.1 4.16 12.9 45.0% feature · violin
Cluster 14 5 NV2g002519000.1 1.71 12.2 67.9% feature · violin
Cluster 14 6 NV2g023250000.1 1.57 11.5 74.5% feature · violin
Cluster 14 7 NV2g005665000.1 2.58 11.3 48.4% feature · violin
Cluster 14 8 NV2g024291000.1 4.01 11.1 39.3% feature · violin
Cluster 14 9 NV2g022014000.1 5.41 10.9 35.5% feature · violin
Cluster 14 10 NV2g023778000.1 1.02 10.9 82.8% feature · violin
Cluster 14 11 NV2g005269000.1 3.99 10.6 37.2% feature · violin
Cluster 14 12 NV2g008263000.1 2.84 10.6 43.0% feature · violin
Cluster 14 13 NV2g023251000.1 1.63 10.4 63.6% feature · violin
Cluster 14 14 NV2g004487000.1 2.53 10.2 43.3% feature · violin
Cluster 14 15 NV2g021099000.1 1.13 10.1 76.5% feature · violin
Cluster 14 16 NV2g012629000.1 3.68 9.9 34.7% feature · violin
Cluster 14 17 NV2g005973000.1 1.14 9.5 71.6% feature · violin
Cluster 14 18 NV2g021275000.1 3.39 9.4 34.1% feature · violin
Cluster 14 19 NV2g019908000.1 1.36 9.4 64.8% feature · violin
Cluster 14 20 NV2g023633000.1 5.12 9.3 30.4% feature · violin
Cluster 14 21 NV2g005524000.1 1.47 9.1 58.7% feature · violin
Cluster 14 22 NV2g018912000.1 1.58 9.0 52.1% feature · violin
Cluster 14 23 NV2g010435000.1 1.67 8.8 49.6% feature · violin
Cluster 14 24 NV2g007069000.1 1.47 8.6 52.1% feature · violin
Cluster 14 25 NV2g022689000.1 5.08 8.6 28.1% feature · violin
Cluster 14 26 NV2g004071000.1 1.65 8.3 47.9% feature · violin
Cluster 14 27 NV2g007161000.1 2.97 8.2 31.5% feature · violin
Cluster 14 28 NV2g021324000.1 1.14 8.1 63.0% feature · violin
Cluster 14 29 NV2g004680000.1 1.45 8.1 50.4% feature · violin
Cluster 14 30 NV2g005824000.1 1.07 8.0 69.1% feature · violin
Cluster 14 31 NV2g022055000.1 1.58 8.0 44.4% feature · violin
Cluster 14 32 NV2g024723000.1 0.94 7.9 81.1% feature · violin
Cluster 14 33 NV2g005465000.1 1.33 7.7 52.1% feature · violin
Cluster 14 34 NV2g000168000.1 3.31 7.7 27.8% feature · violin
Cluster 14 35 NV2g009599000.1 1.38 7.6 47.9% feature · violin
Cluster 14 36 NV2g003683000.1 2.99 7.6 28.9% feature · violin
Cluster 14 37 NV2g022015000.1 1.12 7.4 59.6% feature · violin
Cluster 14 38 NV2g023940000.1 1.99 7.4 35.5% feature · violin
Cluster 14 39 NV2g014214000.1 1.93 7.4 35.5% feature · violin
Cluster 14 40 NV2g021274000.1 3.72 7.2 24.9% feature · violin
Cluster 14 41 NV2g018324000.1 1.60 7.2 41.0% feature · violin
Cluster 14 42 NV2g015027000.1 4.16 7.1 24.1% feature · violin
Cluster 14 43 NV2g020129000.1 1.70 7.0 38.7% feature · violin
Cluster 14 44 NV2g019634000.1 3.13 7.0 28.4% feature · violin
Cluster 14 45 NV2g007752000.1 1.15 6.9 52.1% feature · violin
Cluster 14 46 NV2g002165000.1 0.66 6.9 86.8% feature · violin
Cluster 14 47 NV2g013531000.1 0.88 6.8 65.6% feature · violin
Cluster 14 48 NV2g004070000.1 0.73 6.8 78.5% feature · violin
Cluster 14 49 NV2g000239000.1 1.68 6.8 37.0% feature · violin
Cluster 14 50 NV2g020310000.1 2.52 6.8 29.5% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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