Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NV2g025016000.1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 25 1 NV2g025460000.1 5.54 9.0 66.2% feature · violin
Cluster 25 2 NV2g025458000.1 5.13 7.1 52.1% feature · violin
Cluster 25 3 NV2g004262000.1 3.55 7.0 59.2% feature · violin
Cluster 25 4 NV2g025320000.1 1.15 7.0 95.8% feature · violin
Cluster 25 5 NV2g006024000.1 4.69 6.8 50.7% feature · violin
Cluster 25 6 NV2g025210000.1 1.03 6.7 94.4% feature · violin
Cluster 25 7 NV2g024326000.1 0.82 6.6 91.5% feature · violin
Cluster 25 8 NV2g009798000.1 4.71 6.6 49.3% feature · violin
Cluster 25 9 NV2g024396000.1 0.99 6.5 95.8% feature · violin
Cluster 25 10 NV2g025180000.1 1.04 6.5 93.0% feature · violin
Cluster 25 11 NV2g002713000.1 2.19 6.5 70.4% feature · violin
Cluster 25 12 NV2g012508000.1 5.33 6.5 47.9% feature · violin
Cluster 25 13 NV2g003891000.1 1.83 6.1 81.7% feature · violin
Cluster 25 14 NV2g025266000.1 4.13 6.1 47.9% feature · violin
Cluster 25 15 NV2g009803000.1 3.30 6.0 50.7% feature · violin
Cluster 25 16 NV2g009713000.1 1.16 5.9 87.3% feature · violin
Cluster 25 17 NV2g002816000.1 0.86 5.9 94.4% feature · violin
Cluster 25 18 NV2g003583000.1 4.30 5.8 46.5% feature · violin
Cluster 25 19 NV2g004263000.1 3.74 5.7 46.5% feature · violin
Cluster 25 20 NV2g004721000.1 3.18 5.6 52.1% feature · violin
Cluster 25 21 NV2g012154000.1 1.12 5.6 78.9% feature · violin
Cluster 25 22 NV2g002519000.1 1.67 5.5 64.8% feature · violin
Cluster 25 23 NV2g007661000.1 1.02 5.4 97.2% feature · violin
Cluster 25 24 NV2g011038000.1 0.46 5.3 98.6% feature · violin
Cluster 25 25 NV2g025216000.1 2.39 5.3 56.3% feature · violin
Cluster 25 26 NV2g016827000.1 4.76 5.3 40.8% feature · violin
Cluster 25 27 NV2g009614000.1 0.89 5.2 94.4% feature · violin
Cluster 25 28 NV2g025457000.1 4.19 5.2 40.8% feature · violin
Cluster 25 29 NV2g025016000.1 0.94 5.2 93.0% feature · violin
Cluster 25 30 NV2g009987000.1 3.60 5.0 40.8% feature · violin
Cluster 25 31 NV2g003454000.1 0.77 5.0 95.8% feature · violin
Cluster 25 32 NV2g012509000.1 5.16 5.0 36.6% feature · violin
Cluster 25 33 NV2g025312000.1 0.97 5.0 81.7% feature · violin
Cluster 25 34 NV2g010309000.1 4.39 4.9 36.6% feature · violin
Cluster 25 35 NV2g010086000.1 0.70 4.9 84.5% feature · violin
Cluster 25 36 NV2g011122000.1 0.65 4.6 91.5% feature · violin
Cluster 25 37 NV2g012488000.1 4.58 4.6 33.8% feature · violin
Cluster 25 38 NV2g008908000.1 1.45 4.6 81.7% feature · violin
Cluster 25 39 NV2g012348000.1 4.23 4.5 35.2% feature · violin
Cluster 25 40 NV2g025168000.1 3.44 4.4 36.6% feature · violin
Cluster 25 41 NV2g010660000.1 6.16 4.4 31.0% feature · violin
Cluster 25 42 NV2g009757000.1 1.67 4.2 57.7% feature · violin
Cluster 25 43 NV2g004070000.1 1.06 4.2 83.1% feature · violin
Cluster 25 44 NV2g025256000.1 2.84 4.2 39.4% feature · violin
Cluster 25 45 NV2g024723000.1 0.96 4.2 77.5% feature · violin
Cluster 25 46 NV2g008483000.1 2.07 4.1 43.7% feature · violin
Cluster 25 47 NV2g004239000.1 1.89 4.0 47.9% feature · violin
Cluster 25 48 NV2g011636000.1 0.49 3.9 83.1% feature · violin
Cluster 25 49 NV2g009723000.1 3.51 3.9 33.8% feature · violin
Cluster 25 50 NV2g011736000.1 1.21 3.9 60.6% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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