Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching IPR003903 across 1 genomes (restricted to AAURI2) · 132 ms.

Species with hits:← all speciesAAURI2 12
SpeciesGene IDInterPro termMatchSourceBrowser
AAURI2scaffold162.g8.t6IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold330.g14.t2IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold117.g13.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold339.g20.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold339.g20.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold162.g8.t5IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold330.g14.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold41.g37.t2IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold41.g37.t2IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold41.g37.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold41.g37.t1IPR003903Ubiquitin interacting motifInterproscanJBrowse
AAURI2scaffold330.g14.t3IPR003903Ubiquitin interacting motifInterproscanJBrowse

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