Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 20 gene–annotation pairs matching IPR003954 across 1 genomes (restricted to Aurelia aurita) · 4 ms.

Species with hits:← all speciesAurelia aurita 20
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia auritascaffold189.g13.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold189.g13.t3IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold6.g191.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold188.g44.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold3.g157.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold189.g13.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t3IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t3IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold3.g157.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t4IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t4IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold45.g58.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold210.g24.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold6.g189.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold64.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold64.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Aurelia auritascaffold64.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse

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