Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 23 gene–annotation pairs matching IPR003954 across 1 genomes (restricted to Acropora intermedia) · 3 ms.

Species with hits:← all speciesAcropora intermedia 23
SpeciesGene IDInterPro termMatchSourceBrowser
Acropora intermediaaint_s0047.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0047.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0047.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0047.g27.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0095.g5.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0033.g13.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0033.g13.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0346.g18.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0070.g102.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0099.g43.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0076.g16.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0076.g16.t2IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0095.g5.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0480.g11.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0480.g11.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0480.g11.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0076.g16.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse
Acropora intermediaaint_s0076.g16.t1IPR003954RNA recognition motif domain, eukaryoteInterproscanJBrowse

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