Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching IPR005490 across 1 genomes (restricted to Pachyseris speciosa) · 9 ms.

Species with hits:← all speciesPachyseris speciosa 5
SpeciesGene IDInterPro termMatchSourceBrowser
Pachyseris speciosapspe_0.1.m1.24833.m1IPR005490L,D-transpeptidase catalytic domainInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.24833.m1IPR005490L,D-transpeptidase catalytic domainInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.43361.m1IPR005490L,D-transpeptidase catalytic domainInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.43358.m1IPR005490L,D-transpeptidase catalytic domainInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.27543.m1IPR005490L,D-transpeptidase catalytic domainInterproscanJBrowse

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