Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching IPR019354 across 1 genomes (restricted to Sanderia malayensis) · 3 ms.

Species with hits:← all species Sanderia malayensis 6

Species	Gene ID	InterPro term	Match	Source	Browser
Sanderia malayensis	ENSXQXP00000024535.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000024535.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000024524.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000024524.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000024515.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000024515.1	IPR019354	Nonsense-mediated mRNA decay factor SMG8-like	Interproscan	JBrowse