Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching IPR038729 across 1 genomes (restricted to Aurelia aurita complex sp. Pacific) · 8 ms.

Species with hits:← all speciesAurelia aurita complex sp. Pacific 6
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold7.g51.t1IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold716.g3.t5IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold622.g3.t1IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold2042.g4.t1IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold2215.g1.t1IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold716.g3.t4IPR038729Rad50/SbcC-type AAA domainInterproscanJBrowse

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