Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching IPR039762 across 1 genomes (restricted to Aurelia sp. 4 Dawson et al 2005) · 1 ms.

Species with hits:← all speciesAurelia sp. 4 Dawson et al 2005 3
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000031327.1IPR039762Nonsense-mediated mRNA decay protein Nmd2/UPF2InterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000031329.1IPR039762Nonsense-mediated mRNA decay protein Nmd2/UPF2InterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000031328.1IPR039762Nonsense-mediated mRNA decay protein Nmd2/UPF2InterproscanJBrowse

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