Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching IPR039779 across 1 genomes (restricted to Acropora echinata) · 10 ms.

Species with hits:← all speciesAcropora echinata 8
SpeciesGene IDInterPro termMatchSourceBrowser
Acropora echinataaech_s0021.g192.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0031.g60.t2IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0002.g157.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0031.g60.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0002.g157.t2IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s2060.g1.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0069.g37.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse
Acropora echinataaech_s0026.g56.t1IPR039779RFX-like DNA-binding proteinInterproscanJBrowse

TOP