Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching IPR042556 across 1 genomes (restricted to Scolanthus callimorphus) · 0 ms.

Species with hits:← all speciesScolanthus callimorphus 3
SpeciesGene IDInterPro termMatchSourceBrowser
Scolanthus callimorphusNY_Scal100_v1.42080.1IPR042556Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamilyInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.51855.1IPR042556Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamilyInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.15954.1IPR042556Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamilyInterproscanJBrowse

TOP