Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching IPR050079 across 1 genomes (restricted to Acropora florida) · 2 ms.

Species with hits:← all speciesAcropora florida 11
SpeciesGene IDInterPro termMatchSourceBrowser
Acropora floridaaflo_s0040.g102.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0421.g16.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0218.g15.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s3895.g1.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0163.g105.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0040.g102.t2IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0126.g57.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0367.g15.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0269.g26.t1IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0258.g29.t2IPR050079DEAD box RNA helicaseInterproscanJBrowse
Acropora floridaaflo_s0258.g29.t3IPR050079DEAD box RNA helicaseInterproscanJBrowse

TOP