Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching IPR050090 across 1 genomes (restricted to Pachyseris speciosa) · 2 ms.

Species with hits:← all speciesPachyseris speciosa 14
SpeciesGene IDInterPro termMatchSourceBrowser
Pachyseris speciosapspe_0.1.m1.21225.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.45543.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.37037.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.23189.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.37830.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.61568.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.20375.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.58043.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.6876.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.64972.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.65211.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.26949.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.18832.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse
Pachyseris speciosapspe_0.1.m1.35121.m1IPR050090Bacterial tyrosine recombinase XerC/XerD complexInterproscanJBrowse

TOP