Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching IPR050394 across 1 genomes (restricted to Aurelia aurita) · 2 ms.

Species with hits:← all speciesAurelia aurita 11
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia auritascaffold85.g41.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold48.g42.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold23.g146.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold85.g42.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold85.g42.t2IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold23.g148.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold351.g6.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold151.g30.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold17.g149.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold151.g30.t2IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse
Aurelia auritascaffold5.g133.t1IPR050394Homeobox NK-like transcription regulatorsInterproscanJBrowse

TOP