Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching IPR050863 across 1 genomes (restricted to AAURI1) · 345 ms.

Species with hits:← all speciesAAURI1 9
SpeciesGene IDInterPro termMatchSourceBrowser
AAURI1scaffold370.g21.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold156.g46.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold30.g100.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold28.g6.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold42.g60.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold874.g2.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold385.g5.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold71.g69.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse
AAURI1scaffold176.g7.t1IPR050863Centromere and Transposable Element-Derived ProteinInterproscanJBrowse

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