Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PTHR12001 across 1 genomes (restricted to CSALA) · 40 ms.

Species with hits:← all speciesCSALA 7
SpeciesGene IDPANTHER termMatchSourceBrowser
CSALAENSOFVP00000030956.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000030781.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000024087.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000024078.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000030772.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000030946.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse
CSALAENSOFVP00000024066.1PTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscanJBrowse

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