Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PTHR19860 across 1 genomes (restricted to AAURI2) · 28 ms.

Species with hits:← all speciesAAURI2 11
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold1060.g3.t2PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1060.g3.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1332.g2.t2PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1469.g1.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold853.g8.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1060.g4.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1060.g3.t3PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1332.g2.t3PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1332.g2.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold6990.g1.t1PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse
AAURI2scaffold1060.g3.t4PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscanJBrowse

TOP