Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PTHR19961 across 1 genomes (restricted to PSINE2) · 31 ms.

Species with hits:← all speciesPSINE2 9
SpeciesGene IDPANTHER termMatchSourceBrowser
PSINE2evm.model.contig_48546.4PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_47000.3PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_58220.2PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_88182.2PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_48952.3PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_50851.1PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_47000.2PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_58220.1PTHR19961FIMBRIN/PLASTINInterproscanJBrowse
PSINE2evm.model.contig_17849.1PTHR19961FIMBRIN/PLASTINInterproscanJBrowse

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