Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PTHR23180 across 1 genomes (restricted to AAURI2) · 28 ms.

Species with hits:← all speciesAAURI2 7
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold784.g13.t1PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold784.g13.t2PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold3379.g2.t1PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold98.g20.t2PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold328.g17.t1PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold328.g17.t2PTHR23180CENTAURIN/ARFInterproscanJBrowse
AAURI2scaffold784.g13.t3PTHR23180CENTAURIN/ARFInterproscanJBrowse

TOP