Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PTHR23349 across 1 genomes (restricted to AAURI2) · 29 ms.

Species with hits:← all speciesAAURI2 6
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold1163.g3.t1PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse
AAURI2scaffold1.g13.t2PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse
AAURI2scaffold1.g13.t1PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse
AAURI2scaffold908.g1.t1PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse
AAURI2scaffold1473.g3.t1PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse
AAURI2scaffold193.g7.t1PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscanJBrowse

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