Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PTHR43134 across 1 genomes (restricted to PSINE2) · 35 ms.

Species with hits:← all speciesPSINE2 4
SpeciesGene IDPANTHER termMatchSourceBrowser
PSINE2evm.model.contig_62233.2PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscanJBrowse
PSINE2evm.model.contig_5671.1PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscanJBrowse
PSINE2evm.model.contig_62233.3PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscanJBrowse
PSINE2evm.model.contig_18719.5PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscanJBrowse

TOP