Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PTHR43780 across 1 genomes (restricted to PSINE2) · 62 ms.

Species with hits:← all speciesPSINE2 11
SpeciesGene IDPANTHER termMatchSourceBrowser
PSINE2evm.model.contig_15308.2PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_21255.14PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_29030.2PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_17689.1PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_82935.1PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_87255.1PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_32181.2PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_23827.3PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_64424.1PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_41056.2PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse
PSINE2evm.model.contig_28991.2PTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscanJBrowse

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