Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching PTHR46065 across 1 genomes (restricted to AMURI) · 30 ms.

Species with hits:← all species AMURI 3

Species	Gene ID	PANTHER term	Match	Source	Browser
AMURI	amur_s0179.g10.t1	PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan	JBrowse
AMURI	amur_s0161.g20.t1	PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan	JBrowse
AMURI	amur_s0037.g91.t1	PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan	JBrowse