Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PTHR47194 across 1 genomes (restricted to AAURI2) · 28 ms.

Species with hits:← all speciesAAURI2 11
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold222.g15.t2PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g16.t1PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g16.t2PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold601.g1.t1PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold169.g3.t1PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g16.t3PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold1314.g3.t1PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g15.t1PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g16.t6PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g16.t5PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse
AAURI2scaffold222.g15.t3PTHR47194SORTING NEXIN-29-RELATEDInterproscanJBrowse

TOP