Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF00047 across 1 genomes (restricted to AAURI2) · 41 ms.

Species with hits:← all speciesAAURI2 16
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1880.g2.t2PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1569.g1.t2PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1569.g1.t2PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold2733.g1.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1880.g2.t3PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold408.g5.t2PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold408.g5.t2PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1097.g4.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1097.g4.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold983.g1.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1569.g1.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1569.g1.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold177.g18.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold1880.g2.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold408.g5.t1PF00047Immunoglobulin domainInterproscanJBrowse
AAURI2scaffold781.g13.t1PF00047Immunoglobulin domainInterproscanJBrowse

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