Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 35 gene–annotation pairs matching PF00060 across 1 genomes (restricted to AAURI2) · 48 ms.

Species with hits:← all speciesAAURI2 35
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold525.g14.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold525.g14.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold128.g24.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g9.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold495.g5.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold525.g15.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g39.t3PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold3902.g1.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold17.g38.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g8.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold2038.g1.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold9.g43.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g4.t5PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold525.g13.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold585.g8.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g39.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g39.t4PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g37.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g37.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold2250.g1.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold675.g2.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold495.g5.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold17.g38.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold2038.g1.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g38.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold51.g39.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g4.t3PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g4.t4PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold205.g11.t3PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold416.g4.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold675.g2.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold58.g29.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold242.g2.t2PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold242.g2.t1PF00060Ligand-gated ion channelInterproscanJBrowse
AAURI2scaffold3627.g1.t1PF00060Ligand-gated ion channelInterproscanJBrowse

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