Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF00066 across 1 genomes (restricted to AAURI2) · 33 ms.

Species with hits:← all speciesAAURI2 14
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1113.g7.t3PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t3PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t3PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t4PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t4PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t4PF00066LNR domainInterproscanJBrowse
AAURI2scaffold21.g7.t1PF00066LNR domainInterproscanJBrowse
AAURI2scaffold438.g12.t1PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t1PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t1PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t1PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t2PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t2PF00066LNR domainInterproscanJBrowse
AAURI2scaffold1113.g7.t2PF00066LNR domainInterproscanJBrowse

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