Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF00077 across 1 genomes (restricted to PACUT) · 35 ms.

Species with hits:← all speciesPACUT 5
SpeciesGene IDPfam termMatchSourceBrowser
PACUTPocillopora_acuta_HIv2___RNAseq.g29331.t1PF00077Retroviral aspartyl proteaseInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g7750.t1PF00077Retroviral aspartyl proteaseInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g25574.t1PF00077Retroviral aspartyl proteaseInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g22186.t1PF00077Retroviral aspartyl proteaseInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g10202.t1PF00077Retroviral aspartyl proteaseInterproscanJBrowse

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