Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF00088 across 1 genomes (restricted to AMYRI) · 68 ms.

Species with hits:← all species AMYRI 12

Species	Gene ID	Pfam term	Match	Source	Browser
AMYRI	BRAKERYMEP00000031561.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000003993.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000031543.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000006113.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000003713.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000003713.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000023324.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000035467.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000000613.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000000613.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000009155.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000011738.1	PF00088	Trefoil (P-type) domain	Interproscan	JBrowse