Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 26 gene–annotation pairs matching PF00097 across 1 genomes (restricted to AAURI2) · 28 ms.

Species with hits:← all speciesAAURI2 26
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1298.g1.t2PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold997.g1.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold2269.g4.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1298.g1.t3PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold804.g11.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold663.g7.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1087.g2.t2PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold140.g14.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold292.g17.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold823.g1.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold30.g26.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1122.g10.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold168.g6.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1087.g2.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1122.g9.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold256.g17.t2PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold146.g16.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold1298.g1.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold146.g16.t2PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold3098.g3.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold256.g17.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold127.g12.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold168.g6.t2PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold156.g27.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold138.g16.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse
AAURI2scaffold177.g22.t1PF00097Zinc finger, C3HC4 type (RING finger)InterproscanJBrowse

TOP