Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF00105 across 1 genomes (restricted to AAURI2) · 54 ms.

Species with hits:← all speciesAAURI2 8
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold438.g10.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold114.g9.t2PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold1428.g4.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold1701.g1.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold1701.g1.t2PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold924.g8.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold56.g33.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse
AAURI2scaffold114.g9.t1PF00105Zinc finger, C4 type (two domains)InterproscanJBrowse

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