Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF00125 across 1 genomes (restricted to AAURI2) · 22 ms.

Species with hits:← all speciesAAURI2 10
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold204.g3.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold374.g17.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold104.g10.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold3332.g1.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold1826.g6.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold1826.g10.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold681.g3.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold890.g17.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold3571.g1.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse
AAURI2scaffold83.g17.t1PF00125Core histone H2A/H2B/H3/H4InterproscanJBrowse

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