Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching PF00227 across 1 genomes (restricted to Actinoscyphia liui) · 1 ms.

Species with hits:← all speciesActinoscyphia liui 15
SpeciesGene IDPfam termMatchSourceBrowser
Actinoscyphia liuigene02238.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene19505.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene02247.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene14988.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene26033.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene00303.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene06238.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene00826.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene11544.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene03548.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene27305.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene20522.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene12420.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene13956.t1PF00227Proteasome subunitInterproscanJBrowse
Actinoscyphia liuigene10976.t1PF00227Proteasome subunitInterproscanJBrowse

TOP