Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF00229 across 1 genomes (restricted to AMURI) · 47 ms.

Species with hits:← all speciesAMURI 13
SpeciesGene IDPfam termMatchSourceBrowser
AMURIamur_s0001.g241.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s1197.g2.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0001.g239.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0268.g2.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0148.g77.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0042.g76.t2PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0042.g76.t2PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0001.g239.t2PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s1197.g1.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0096.g59.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0001.g238.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0042.g76.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse
AMURIamur_s0001.g237.t1PF00229TNF(Tumour Necrosis Factor) family InterproscanJBrowse

TOP