Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 48 gene–annotation pairs matching PF00240 across 1 genomes (restricted to AAURI2) · 58 ms.

Species with hits:← all speciesAAURI2 48
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold501.g1.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold1205.g2.t3PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold8.g46.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold9.g21.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold75.g28.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold415.g6.t2PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold415.g6.t3PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold580.g9.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold103.g21.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold1205.g2.t2PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold1010.g3.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold2.g2.t3PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold601.g6.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold214.g12.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold2.g2.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold2.g2.t2PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold48.g2.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold101.g45.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold241.g9.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold692.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold692.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold692.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold692.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold692.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold22.g15.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold415.g6.t4PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold832.g6.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold620.g10.t2PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold620.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold620.g10.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold246.g29.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold415.g6.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold9.g22.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold89.g27.t3PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold442.g1.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold786.g2.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold89.g27.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold6949.g1.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold2.g2.t4PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold1010.g4.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold536.g8.t1PF00240Ubiquitin familyInterproscanJBrowse
AAURI2scaffold254.g17.t1PF00240Ubiquitin familyInterproscanJBrowse

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