Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF00275 across 1 genomes (restricted to Paramuricea clavata) · 10 ms.

Species with hits:← all speciesParamuricea clavata 9
SpeciesGene IDPfam termMatchSourceBrowser
Paramuricea clavataCAB4002598.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4043340.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4009576.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4002601.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4002600.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4045397.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4002599.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4009575.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse
Paramuricea clavataCAB4009577.1PF00275EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)InterproscanJBrowse

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