Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF00348 across 1 genomes (restricted to HOCTO) · 81 ms.

Species with hits:← all speciesHOCTO 8
SpeciesGene IDPfam termMatchSourceBrowser
HOCTOg14461.t1.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOBRAKERHOCP00005009973.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOBRAKERHOCP00005001426.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOBRAKERHOCP00005001426.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOg7381.t2.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOg7381.t2.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOBRAKERHOCP00005001425.1PF00348Polyprenyl synthetaseInterproscanJBrowse
HOCTOg7381.t1.1PF00348Polyprenyl synthetaseInterproscanJBrowse

TOP