Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF00488 across 1 genomes (restricted to ATENU) · 47 ms.

Species with hits:← all species ATENU 6

Species	Gene ID	Pfam term	Match	Source	Browser
ATENU	aten_s0059.g37.t1	PF00488	MutS domain V	Interproscan	JBrowse
ATENU	aten_s0049.g37.t1	PF00488	MutS domain V	Interproscan	JBrowse
ATENU	aten_s0005.g2.t1	PF00488	MutS domain V	Interproscan	JBrowse
ATENU	aten_s0207.g14.t1	PF00488	MutS domain V	Interproscan	JBrowse
ATENU	aten_s0092.g46.t1	PF00488	MutS domain V	Interproscan	JBrowse
ATENU	aten_s0149.g16.t1	PF00488	MutS domain V	Interproscan	JBrowse