Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF00554 across 1 genomes (restricted to ASPAT) · 67 ms.

Species with hits:← all speciesASPAT 8
SpeciesGene IDPfam termMatchSourceBrowser
ASPATENSEWQP00005020751.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005026784.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005026799.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005026794.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005026806.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005020732.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005020718.1PF00554Rel homology DNA-binding domainInterproscanJBrowse
ASPATENSEWQP00005026786.1PF00554Rel homology DNA-binding domainInterproscanJBrowse

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