Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF00562 across 1 genomes (restricted to Acropora spathulata) · 2 ms.

Species with hits:← all speciesAcropora spathulata 11
SpeciesGene IDPfam termMatchSourceBrowser
Acropora spathulataENSEWQP00005039702.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005039685.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005020028.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005020009.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005019961.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005019982.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005039727.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005011942.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005011973.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005039745.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
Acropora spathulataENSEWQP00005011957.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse

TOP